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Development « genoDive.org

Development

DAS


The Distributed Annotation System (DAS) allows clients to access many disperse genome and protein annotation sources in a coordinate manner.

The DAS was developed to provide an integrated interface to the annotation data from diverse sources. It allows clients to access DAS data sources from different institutions and geographically dispersed using a simple standard protocol and to fetch data from them.

The DAS protocol is based on HTTP and XML. To request information, the client makes an HTTP request encoding all needed parameters in the URL and gets an XML file with the needed data.

Software architecture


genoDives are built on the OpenGL and libDAS. The libDAS includes a low level API, and C++ Class library for genome data integration. Graphics and imaging model implementation based on OpenGL.
gd_architecture2009

Developers


libDAS core, libDAS util, dasConsole, genoDive Eu
Satoshi Ebihara, ex. cell graphics
Shinsuke Yamaguchi, Delta Cat
Tsuyoshi Mishina, cell graphics

genoDive Pro
Yuusei Mizukuchi, ACQUIRE
Satoshi Hasegawa, ACQUIRE
Makiko Okuda, ACQUIRE
Takashi Iwama, ACQUIRE


Original version
Kunihiro Nishimura, The Univ. of Tokyo

Technical supervise
Mitsuteru Nakao, DBCLS, Kazusa DNA Res. Inst.

Supervise
Yasukazu Nakamura, DDBJ, Kazusa DNA Res. Inst

Direction and Desgin
Shinobu Okamoto, DBCLS, Kazusa DNA Res. Inst.